N-Glycosylation in silico?

More Jorge Levican Asenjo's questions See All

How to Input and Analyze Results for an Asymmetrical Factorial Design in STATISTICA 13.3?

In STATISTICA 13.3, I used the Experimental Design Builder under the Design of Experiments tab to generate a design matrix for an asymmetrical factorial design (1443) with 12 experiments. However,...

29 July 2024 4,155 2 View

What is the relationship between Artificial Intelligence and Communications?

Much is said about AI and the Communication field. Some say that Communications would very much benefit from that intersection. But specifically which areas would benefit from AI? Could it be a...

11 July 2024 5,335 4 View

Protein degradation? how to concentrate low MW proteins?

Hi everyone! So I am trying to concentrate my recombinant proteins in order to make some assays with them, but I need a "considerable" concentration of each. One of my proteins is around 9kDa and...

08 May 2024 5,418 2 View

How reliable is Fiji software for analysis of movement organisms?

Dear all, My question is addresses to reliability regards how reviewers or journal editors would take it when they realize that the methodology of a paper was mainly done through this software. I...

15 April 2024 9,305 0 View

What is the refractive index of MoSi2?

Does anyone know what is the refractive index of MoSi2 and in what medium it can be performed (distilled water or ethyl alcohol)? I pretend to perform a particle-size distribution analysis by...

23 March 2024 6,736 1 View

Where to order research-grade Galleria mellonella?

Does anyone know where to purchase research-grade Galleria mellonella in Europe? I only find the TruLarv from BioSystems Technology, but it seems to be down... Thank you!

11 March 2024 4,800 2 View

Could someone recommend me a valid instrument to measure teaching performance that utilizes AI (Preferably focused on elementary school teachers)?

I am conducting research on the performance of primary school teachers who use AI, and I have not been able to find a validated instrument that fits this situation. I would like to hear your...

22 February 2024 6,052 4 View

Sauropod-like vertebrate teeth?

Is is possible that Cretaceous fish, notosuchians, lepidosaurs, or other vertebrates have a morphology that might be confused with "spoon-shaped" sauropod teeth? I have seen a fossil isolated...

08 December 2023 7,040 2 View

Could someone provide me with two JCPDS cards?

I would need two JCPDS cards: 1. BaO (No. 26-0178) 2. Ba(OH)2 (No. 026-0154) I would appreciate a lot if someone could send me both cards... I am a bit desperate. Thanks again for your time!

08 October 2023 4,324 4 View

Is there an accepted taxonomy or categorization of environmental issues (e.g., waste management, water pollution, etc.)?

I am currently working on enhancing the H4rmony dataset, which aims to fine-tune Large Language Models in AI to align them with ecolinguistic values. I'm seeking this classification to assist in...

27 September 2023 972 3 View

How do I replace a file with a more recent version of a paper that was uploaded to ResearchGate?

The paper in question is "Interpolation of Nitrogen Fertilizer Use in Canada from Fertilizer Use Surveys". This paper was very recently published by Agronomy (MDPI). Agronomy has, in the last day...

07 August 2024 9,934 3 View

How to solve g_mmpbsa error?

Program: g_mmpbsa, version 2024.1 Source file: extrn_apbs.cxx (line 152) Fatal error: Failed to execute command: $APBS pybYcUWA.in --output-file=pybYcUW.out

07 August 2024 6,066 0 View

What precautions should be taken while handling S. aureus enterotoxin Type B in the lab?

I would like to understand potential safety concerns while handling SEB in the lab. Especially while working in animal house facility. Would like to know precautions for handling. Sigma MSDS...

07 August 2024 6,034 3 View

How do you delete a duplicate pdf for the same paper on ResearchGate?

The first pdf file I uploaded had an error. So I uploaded an updated, corrected pdf of that paper with a different pdf name. I dpon't want the old copy to be download or read.

07 August 2024 9,508 1 View

AUX gas reading problem on QE with full MS and PRM method in one run?

Dear QE-users, In the method where full MS positive mode and PRM mode are used, we always get an incorrect auxiliary gas reading (41 instead of 25). This only happens in this method; other...

06 August 2024 4,953 0 View

How to understand this crystallographic phenomenon of low temperature crystals in zeolite?

During low-temperature testing, new diffraction peaks that appear could be indicative of several phenomena. In one of our tests, we observed notable new peaks around 40° and 45° in a specific...

06 August 2024 726 3 View

How to Add Missing Water Molecules in Protein-Membrane Simulations?

I have protein-membrane simulations (PDB, PSF, DCD) and have noticed that water molecules near the protein are not visible in the simulations. How can I fix this issue? Is there a way to place the...

04 August 2024 1,200 2 View

JCPDS 65-7246 file please?

Dear Researchers Kindly share JCPDS 65-7246 file Thanks in advance

04 August 2024 5,613 1 View

Dirty and clean?

Hi everyone I need a file with a dirty and clean potato image

04 August 2024 7,199 4 View

How to change the version of the article full-text pdf file?

How to change the displayed full article text to its corrected version? In the file on the page of the journal where I published the article, there was an error in the text, the table is...

30 July 2024 3,229 2 View

Annemarie Honegger

Try GlyProt ( http://www.glycosciences.de/modeling/glyprot/php/main.php ) or Glycosylator ( https://github.com/tlemmin/glycosylator )

AllosMod may also be useful ( https://modbase.compbio.ucsf.edu/allosmod/help.cgi?type=glyc )

Keerthic Aswin

Hi,

you can also try CHARMM-GUI for glycosylation of your interest protein.

There is a tutorial to help you generate them.

https://charmm-gui.org/?doc=demo&id=cov_2_s&lesson=2

Good luck!

Rafik Menad

https://pubmed.ncbi.nlm.nih.gov/23473666/