I have been trying to transfect primary mouse neural progenitor cells (wildtype and heterozygous for our gene of interest) with a plasmid expressing dCas9-VP64 and a plasmid expressing sgRNA for CRISPR activation of the gene.

We have tried a MSCV plasmid expressing dCas9-VP64 under the MSCV-LTR promoter, and we successfully activated the gene's expression. However, our goal is to observe the rescue of phenotypes in neurons, and retrovirus cannot infect non-dividing cells. So, I tried cloning the dCas9 onto an AAV backbone plasmid and it is expressed under CMV and T7 promoters. We used the same sgRNA plasmids. But this led to unsuccessful activation.

Can someone please provide a possible explanation for why I see these varying results after transfection (nucleofection) between these plasmids? Is the cell type the limiting factor? Is LTR just that much better for expressing genes in proliferating cell types compared to CMV?

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