Is there any site that I can find the TCGA RNAseq data as RPKM unit?

Abolfazl Razzaghdoust @Abolfazl_Razzaghdoust

01 January 2018 1 9K Report

The TCGA database has released its RNAseq data as FPKM unit, but I need these values as RPKM.

Is there any website/database that I can find these data as RPKM unit? If not, is there any conversion method?

The level 3 RNA-seq data from TCGA provides gene expression in terms of FPKM. From what I know RPKM is for single end RNA-seq, while FPKM is for paired end RNA-seq.

Check this link : http://www.rna-seqblog.com/rpkm-fpkm-and-tpm-clearly-explained/

Better to use the provided expression metric, unless you intend to secure raw data from TCGA and process from the start.

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