Is there any offline software can can work like functional annotation clustering in DAVID?

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Pu Xia

Try this Bioconductor Package: "clusterProfiler". Very powerful.

Good luck

Junjiang Zhang

I'm using this package,but it seems not so convenient for the GO clustering, which could get a result like this .

Annotation Cluster 1 Enrichment Score: 7.621268229661738

Category Term Count % PValue

GOTERM_CC_FAT GO:0044459~plasma membrane part 288 19.72603 8.54E-18

GOTERM_CC_FAT GO:0005886~plasma membrane 420 28.76712 1.11E-13

GOTERM_CC_FAT GO:0031226~intrinsic to plasma membrane 146 10 1.97E-06

GOTERM_CC_FAT GO:0005887~integral to plasma membrane 139 9.520548 1.48E-05

GOTERM_CC_FAT GO:0031224~intrinsic to membrane 498 34.10959 0.002228

GOTERM_CC_FAT GO:0016021~integral to membrane 481 32.94521 0.003023

clusterProfiler is a powerful package for enrcichment analysis,but I don't know how to do this.

Also, how to register a david account? I can't find the link on the website

I got the David account already！！！through this link https://david.ncifcrf.gov/webservice/register.htm

Anjali Patni

http://www.pantherdb.org/

Check this out