If any protein model is constructed in multiple segments (the segments are from a single protein), is it possible to join those segments into a single final structure? Is this method is correct? If so how is the final refined structure attained?
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Dario Corrada
Maybe your request matches with the following FAQ:
http://www.salilab.org/modeller/FAQ.html#1
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Suresh Gorle
Apart from Modeller, you can do it using VMD too. Later simple minimization and small scale MD simulations will result a good refined model structure.
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