Need miRNA.gtf genome cordinates for counting miRNA short reads by GFOLD.
Rupesh, don't know about miRBase, but for general GTF GFF conversion, see these pages: http://blog.nextgenetics.net/?e=27
The difference is mainly in the last/attribute column. Also GTF is for genes only, while GFF3 can carry any feature defined by Sequence Ontology.
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