Rupesh Kumar Kesharwani

3 Questions 6 Answers 0 Followers

Questions related from Rupesh Kumar Kesharwani

I would like to have Genome coordinates in .gtf format. Is it possible to convert from .gff3 of miRBase? How?

Need miRNA.gtf genome cordinates for counting miRNA short reads by GFOLD.

15 October 2013 1,626 1 View

What kind of things can I do with a new gene when RefSeq does not show any similarity in blast?

We have found a novel gene during NGS (next generation sequencing by solid run) transcriptome analysis. So let me have your suggestions regarding bioinformatics.

04 February 2013 6,214 7 View

How can I dock RNA and protein? Can anyone give me some suggestion and tools information?

I have build small RNA 3D strucutre by using ERNA3D and wanted to dock it with some proteins that present in PDB database.

02 October 2012 6,403 3 View