I've performed docking with autodock vina, I can see the receptor ligand interaction using GUI of autodock tools but as I have quite a number of vina results, its getting tiresome every time doing same clickery over and over.
Is it possible to find a script doing the task all at once?
Autodock Tools can be used to make a list of ligand-receptor interactions in the docking log file (dlg). Take a look at a related post in the MGL Forum:
http://mgl.scripps.edu/forum/viewtopic.php?f=9&t=2521
Thank you all, but I know how to do this graphically. I was looking for a programmatic way.
If anyone can redirect me the algorithm ADT uses to find interaction, I think I can write a code for my own.
Regards.
Dear Pritam Kumar
I have used Ligplot for AutoDock Vina results, its just showing the carbon atoms and combined structure. I want to know the individual interaction with score. How could I do that please suggest me. Thank you
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