Hi Monidipa,

This topic has been discussed in Researchgate community:

https://www.researchgate.net/post/Is_it_recommended_to_do_docking_for_nano-particles_If_so_can_it_be_done_in_AutoDock

https://www.researchgate.net/post/Any_suggestions_on_docking_of_nanoparticle_to_protein

https://www.researchgate.net/post/How_can_nano_particle_docking_studies_be_carried_out_with_protein

https://www.researchgate.net/post/Can_we_study_the_mechanism_of_nanoparticles_using_docking_studies

https://www.researchgate.net/post/Any_suggestions_on_docking_of_nanoparticle_to_protein2

https://www.researchgate.net/post/how_to_dock_silver_nanoparticle_to_a_protein

https://www.researchgate.net/post/autodock_docking_with_gold_nanoparticles

https://www.researchgate.net/post/Does_anyone_know_about_molecular_docking_studies_for_silver_nanoparticles

https://www.researchgate.net/post/Protein-nanomaterials_docking_with_Schrodinger

https://www.researchgate.net/post/Is_there_any_software_to_do_a_molecular_docking_for_nanoparticles_with_protiens

https://www.researchgate.net/post/how_to_optimize_geometry_of_nanoparticle_for_docking

Article Titanium dioxide nanoparticle-protein interaction explained ...

https://www.researchgate.net/post/Computational_software_for_gold_nanoparticles

Article Docking of HIV protease to silver nanoparticles

https://www.researchgate.net/post/How_to_get_the_3D_structure_or_co-ordinates_of_gold_nanoparticle

https://www.researchgate.net/post/hi_can_any_one_say_what_bioinformatics_tools_to_be_used_for_docking_silver_nanoparticles_with_any_bacterial_proteins

https://www.researchgate.net/post/Any_suggestions_on_docking_of_nanoparticle_to_protein

https://www.researchgate.net/post/Is_it_recommended_to_do_docking_for_nano-particles_If_so_can_it_be_done_in_AutoDock

https://www.researchgate.net/post/Any_suggestions_on_docking_of_nanoparticle_to_protein2

https://www.sciencedirect.com/science/article/pii/S2405580816300255

Article Titanium dioxide nanoparticle-protein interaction explained ...

http://mgldev.scripps.edu/pipermail/autodock/2009-February/005079.html

Hi you can use Hex software. Similar kind of work has been published (Green synthesis of biogenic silver nanoparticles using Solanum tuberosum

extract and their interaction with human serum albumin: Evidence of

“corona” formation through a multi-spectroscopic and molecular docking

analysis)

Mohd Sajid Alia,⁎, Mohammad Altafb, Hamad A. Al-Lohedana