My clinical study measured the blood biomakers (glucose, insulin, glucagon, GLP-1, GIP, amino acids, etc) at baseline before an intervention meal and at multiple time points after an intervention meal.
We did this measure three times using three different intervention meals at three different days. My main objective is to compare whether there is any difference in the change in blood biomarkers after different intervention meals.
There are several AUC calculation methods to do this, such as the total AUC, incremental AUC (ignore the area under baseline) and net incremental AUC (subtract the area under baseline). How to determine which one to use and what is the rationale?