How to call sequence types (ST) from novel MLST dataset?

10 October 2016 0 2K Report

Programs like eBURST and PhyloViz make use of sequence type data describing different alleles for established MLST schemes. I have been having difficulty finding software that can build ST profiles from scratch using novel sets of MLSA genes that do not overlap with the schema already published. Does anyone know of software that can do this?

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