I have done KOG annotation (using blastx) using my de novo assembled transcripts. I got the protein ids for each transcripts. Can any one suggest how should i categorize them to the functional categories (designated from A to S) assigned to KOG?
Dear,
These links may be useful for you :
http://genome.jgi.doe.gov/Tutorial/tutorial/kog.html
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0146812
http://www.scielo.br/pdf/rbfar/v26n3/0102-695X-rbfar-26-03-0334.pdf
Thank you Rezaeipour. Let me check the details.
https://www.researchgate.net/topic/COG
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