Dear Sir ,

It believe that you need to use the specific primers for the identification of fungi and I am attaching link for the idea

plosone/article?id=10.1371/journal.pone.0093849

https://www.omicsonline.org/open-access/assessment-of-fungal-diversity-in-the-environment-using-metagenomics-a-decade-in-review-2165-8056.1000110.php?aid=20959

Dear Dr. Daljeet , thank you

Hello, Yehia,

This might be of help to you:

Article Fungal community analysis by high-throughput sequencing of a...

Hope this helps.

Best,

Arizaldo