Is there any evidence that a single time-course response of multiple biochemical species (with generous number of time points measured) is associated with a unique network structure?
Can we somehow answer this question based on theoretical considerations?
Is there research that tries to address empirically?
Robert D Phair
A lot depends on how many different experimental perturbations you can apply. But in general you will be in the business of testing hypothesized network structures against your data. If you find multiple network structures that can account for all your data, your theoretical/computational model will help you design a good experiment to distinguish among the possible networks.
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