I have a blasn result for a whole genome sequence of a species against a particular gene nucleotide sequence that encodes a protein. For these results the e-value is a bit high but I have 100 % identity and zero % query coverage. Can't totally make sense of this?
Abhijeet Singh
Exactly the result does not make sense. And blast is not good for the whole genome sequences. For whole genome alignments, you can try MUMmer or Mauve or CVTree. But big alignments are often less informative and difficult to interpret.
0 votes
0 thanks
- Badges
- Science topic
- Similar topics
- Philosophy
- Esthetics
- Interpretation
More Gunjan Katyal's questions See All
Similar questions and discussions