I am looking for free and open source software tool that can plot ROC, Area Under ROC and Area Under Precision Recall Curve?
The Weka open source software (http://www.cs.waikato.ac.nz/ml/weka/) can plot these curves. I'm using it successfully for these kind of task.
I guess every half way practical tool can do it. I use and recommend the R-project. It comes with tons of packages and different implementations.
For MATLAB :
ROC :
http://code.google.com/p/matlabtools/source/browse/trunk/graphics/rocCurve.m?r=121
After you plotted ROC, you can compute the area under the curve by function "areaUnderCurve" :
http://www.mathworks.com/matlabcentral/fileexchange/40659-area-under-curve-auc
We developped a webtool to easily analyze all sort of screening results, using all usual metrics in the field. You can generate ROC curves and more very quickly from your browser, see http://stats.drugdesign.fr.
Webtool associated publication : Screening Explorer – An Interactive Tool for the Analysis of Screening Results (http://pubs.acs.org/doi/abs/10.1021/acs.jcim.6b00283)
- Badges
- Science topic
- Similar topics
- Computer Science
- Data Mining