I am trying to dock some halogenated molecules using vina XB but this error shows up every time: "insufficient memory"
C:\Users\jagra\Desktop>vinaXB.exe --config config.txt --
Output will be 1376_out.pdbqt
Detected 8 CPUs
Reading input ... done.
Setting up the scoring function ...
Error: insufficient memory!
Yoshinobu Ishikawa so vina xb uses more RAM than regular vina? Thank you for your help :)
Dear Joao,
Yes, there's an issue in running VinaXB. Please go through following discussion for getting a solution.
https://www.researchgate.net/post/How_to_solve_insufficient_memory_problem_in_VinaXB
The solution is not straightforward, but we will keep the scientific community updated with all the necessary steps in resolving the issue.
Dr. Rajesh Patil
Compiling VinaXB from source in recent versions of ubuntu either in WSL or dual boot is the option for this issue.
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