I am trying to isolate specific cells from mouse testis with laser micro-dissection and am preparing tissue sections to locate my target cells. As my final objective is to get the RNA, I avoided fixing the tissue before the cryo-section and when I checked the tissue under microscope after Hematoxylin staining, I found it hard to identify most of the tissue's details. I also repeated the experiment using Ethanol and Methanol as fixatives, but that also didn't help to solve the problem. To be mentioned here is my samples are frozen and I can not get fresh ones so I have to use it this way.
My question now is how can I improve the tissue integrity of my sections? I appreciate if you can give me any ideas on that.