Hi I have a PDB file for viral envelope and an inhibitor peptide. Now I want to see the binding of that peptide with viral envelope at C and N terminal Which software to use? Can anyone suggest something easier?
You can use any of the Molecular Graphics Software to visualize the interaction in the peptide with viral envelope. The link of the molecular graphics software is given below,
Thank you ver much sir, But i am new to structural biology can you please some basic protocal like steps peptide N & C terminal docking By using Chimera any software it would be help full to analyse the structure and docking study