Yes, there are several basic programs for molecular docking, such as AutoDock, AutoDock Vina, and Dock. These tools help predict the binding of small molecules to their target proteins. They are widely used for drug discovery and molecular interaction studies.
Definitely, There are plenty of programs you can explore while exploring your Molecular Docking based studies like Glide by Schrödinger, Gromacs, Flex, flare pro, Autodock etc.