Hi. 

I'm trying to evaluate a putative GO enrichment in a set of samples coming from tomato chromoplasts. To make an accurate study I would like to test if there's a GO enrichment in the proteome of wild type chromoplasts. In my set of samples there are more than 2000 protein sequences and that seems to be a problem for the geneontology website. Do you know how can I skip this issue?. 

Thanks in advance

Lucio

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