I am looking for a way to directly convert from 4D BOLD dicoms to nii within the OsiriX program. I have tried the exporter plugin, which works fine with mprage and ase series but does not parse out the BOLD information correctly (it maintains the mosaic view). We do not want to use a secondary program such as dcm2nii or MRIcron.
Short answer is no. Your best hope is to contact the author of the NifTi exporter plugin - Deqiang Qiu at Emory University and see if he is willing to work with you on this project. It may be as simple as changing the data matrix in the code.
http://deqiang.webege.com/software.html
Good luck.
I would just use a second program. There are plenty of them out there that do it, and do it well.
We use the the program "to3d" from AFNI, which works very well and is easy.
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