I have peptide sequences. I want to add it into a software to predict whether it has anti-microbial potential.
This web site may have what you are looking for:
https://aps.unmc.edu/
Dear Zhang
you can predict the possible targets for the peptide by pasting your structure or SMILES in the swissprediction tool.
You can as well check the database DBAASP whether your peptide is matching with any of the reported antimicrobial peptides
1.CAMPR3
2. Antimicrobial Peptide Scanner vr.1
3.AntiBP2
4. DBAASP................to name a few amongst 100s of other freely available software and online tools.
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