Hello everybody I have been using GROMACS 2018.1 in the last month and I got an error "core dumped" while running the simulation. Accordingly, I have installed the 2020.1 version and while I am doing pressure equilibration (npt), I had the same error again (I paste it below) which is core dumped. Is it a problem in this version or I might have done something wrong while running the equilibration ? I would really appreciate it, if anyone can guide me. I have pasted the error below Thanks Mohamed :-) GROMACS - gmx mdrun, 2020.1 (-: GROMACS is written by: Emile Apol Rossen Apostolov Paul Bauer Herman J.C. Berendsen Par Bjelkmar Christian Blau Viacheslav Bolnykh Kevin Boyd Aldert van Buuren Rudi van Drunen Anton Feenstra Alan Gray Gerrit Groenhof Anca Hamuraru Vincent Hindriksen M. Eric Irrgang Aleksei Iupinov Christoph Junghans Joe Jordan Dimitrios Karkoulis Peter Kasson Jiri Kraus Carsten Kutzner Per Larsson Justin A. Lemkul Viveca Lindahl Magnus Lundborg Erik Marklund Pascal Merz Pieter Meulenhoff Teemu Murtola Szilard Pall Sander Pronk Roland Schulz Michael Shirts Alexey Shvetsov Alfons Sijbers Peter Tieleman Jon Vincent Teemu Virolainen Christian Wennberg Maarten Wolf Artem Zhmurov and the project leaders: Mark Abraham, Berk Hess, Erik Lindahl, and David van der Spoel
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GROMACS: gmx mdrun, version 2020.1 Executable: /home/abdelaal/build2/gromacs-2020.1/build/bin/gmx Data prefix: /home/abdelaal/build2/gromacs-2020.1 (source tree) Working dir: /home/abdelaal/Desktop/GROMACS/C60:TAPC/C60_GRM/22 Command line: gmx mdrun -v -deffnm npt
Reading file npt.tpr, VERSION 2020.1 (single precision) Changing nstlist from 10 to 100, rlist from 1 to 1
Using 1 MPI thread
Non-default thread affinity set, disabling internal thread affinity
Using 8 OpenMP threads
starting mdrun 'GRM in vacuum' 50000 steps, 25.0 ps. step 44700, remaining wall clock time: 137 s Step 44790 Warning: pressure scaling more than 1%, mu: 1.01937 1.01937 1.01937 Segmentation fault (core dumped)