Hi everyone,

I’m working with EO771 murine breast cancer cells, and I’ve been observing an unusual behavior following gene knockout (using CRISPR gRNA) and gene knockdown (using shRNA).

After transfection:

  • About 70% of the cells become non-adherent, floating in the media within 12 hours.
  • These floating cells consistently die shortly after.
  • The adherent cells survive and proliferate, but once they reach ~70–80% confluency, many start floating and dying again.
  • This same pattern is observed after passaging, regardless of plating density or media refresh.

I’ve ruled out contamination and verified the transfection protocol. My suspicion is that the targeted gene may be linked to cell adhesion or survival, but I’d appreciate insights from others who may have faced a similar issue.

Has anyone experienced something similar in EO771 or other cell lines? Could this indicate a stress response, loss of integrin signaling, or anoikis? Any suggestions for troubleshooting or confirming the underlying mechanism would be greatly appreciated.

Thank you in advance for your feedback!

Best regards,

Saket

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