A computer scientist can never convince students in computer science that how a computer works by just looking into the interconnected gates of the CPU chip without sophisticated principles and theories. Although all connections in a CPU have already been known, nobody may be able to explain the massive connections of gates (see attached figures), if high-level logical (mathematical) models remain unknown. Nobody would understand a computer by just observing its active parts and locations for certain functions because the causality is not that intuitive or straight forward in any super complex system.
This is the same situation across brain science, cognitive science, neurology, physiology, cognitive psychology, and natural intelligence. A hierarchical model of the brain at all the levels, such as the Layered Reference Model of the Brain (LRMB) [ICIC, http://www.ucalgary.ca/icic/], is required in order to enable the reductive/synthesized studies from the top down as well as from the bottom up.