Can anyone suggest how to run FNIRT v6.0 to registering T1-structural to MNI152 in FSL?

02 February 2018 0 2K Report

hello everyone ,

I am trying to run FNIRT in FSL to be to to registering T1-structural to MNI152 and then apply the transform matrix to the FA maps but I could not make it ? any suggestions how it's work ?

Thanks

Manal

Badges
Science topic

More Manal Alosaimi's questions See All

Is this real changes in white matter due to learning ?

Dear all, I found the significant decrease in MD values in in some areas (as you can see in the picture) White Matter in Human Brain after leaning a new tasks, but I am not sure if this real...

11 December 2018 2,630 2 View

Can we run regression analyses, even if the sample sizes of the variables are not equal?

I would like to run regression using training scores and DTI parameters for my participants , the problem is that the number of practical sessions and DTI scan are not equal !! What I need to do...

10 November 2018 9,172 6 View

TBSS Non Significant Findings- How to tell if it is really non-significant or is there an error during data preprocessing?

Dear all, I analyzed multiple FA data for my subjects before and after they learning a new task mainly I am looking for FA changing due to the neuroplasticity with TBSS & voxelwise stats and...

10 November 2018 2,527 13 View

Does anyone have experience with analysis of brain structural changes by using spm software?

Dears, I am a PhD student and I am trying to track or monitor the brain structural changes after six months training and currently I am using spm and I need help to understand my results kind...

09 October 2017 6,035 4 View

How can I realign DTI images together and with T1 for the same person

How can I realign DTI images together and with T1 for the same person? I used FSL to coregistration DTI image with T1 but they were not fitting in perfect way! so do you suggest any software or...

03 April 2017 2,427 2 View

How to define an anisotropic material with asymmetric elastic compliance/stiffness matrix in ANSYS APDL?

I need to model an anisotropic material in which the Poisson's ratio ν_12 ≠ ν_21 and so on. Therefore, the elastic compliance matrix wouldn't be a symmetric one. In ANSYS APDL, for TB,ANEL...

09 August 2024 5,048 2 View

Is it true that $\det(V(A))$ may be only $\pm 1$, depending on $n$, for the last symmetric tridiagonal matrix $A$?

One can try to generalize the Vandermonde determinant in the following direction: Let $A$ be any symmetric $n$-order square matrix. Consider its powers' diagonal elements $(A^k)_{ii}$ and...

08 August 2024 6,690 1 View

AUX gas reading problem on QE with full MS and PRM method in one run?

Dear QE-users, In the method where full MS positive mode and PRM mode are used, we always get an incorrect auxiliary gas reading (41 instead of 25). This only happens in this method; other...

06 August 2024 4,953 0 View

Usage of internal standards in LC-MS/MS analysis?

Have you ever seen a LC-MS/MS method uses both internal standards and external standards (in matrix matching purpose) but the concentrations of internal standards are outside the calibration curve...

05 August 2024 3,084 6 View

People weight in Oaxaca Blinder Decomposition on R?

Hello guys! Do you have experience running a Oaxaca-Blinder decomposition on R applying person weights. How do you suggest doing it? I have a variable PERWT which gives more information on how...

04 August 2024 6,033 0 View

The question is how to use Wavenet transform?

HOW CAN I WRITE A CODE TO USE THE WAVENET TRANSFORM AS A FEATURE EXTRACTION METHOD INSTEAD OF DWT IN MATLAB?

03 August 2024 7,829 0 View

Request a single Lecture notes for math as detailed as this that I can find in one place?

- The Existence/Uniqueness of Solutions to Higher Order Linear Differential Equations - Higher Order Homogenous Differential Equations - Wronskian Determinants of $n$ Functions - Wronskian...

03 August 2024 2,366 0 View

Some new emerging problems on application of RL for scheduling in IoT networks?

I have seen plenty of existing works on applied Reinforcement Learning (RL) policies for optimized scheduling in IoT networks including Q-learning, DQNs, and the newer ones including PPO for...

01 August 2024 8,754 2 View

Tissue homogenization in mouse with FastPrep-24™ 5G - is the D matrix system useful?

I need to lyse and homogenise mouse tissues. So far I have experimented with liver and lung tissue, using matrix D. The liver was completely lysed with 6 repetitions of the standard program, but...

31 July 2024 9,186 0 View

Is it true that science is leaving the era of mathematics and entering the era of matrix mechanics?

We assume this to be true. Science leaves the era of mathematics and enters the era of matrix mechanics and the turning point is the discovery of numerical statistical theory called Cairo...

31 July 2024 3,900 2 View