I have some Eland export files that I have downloaded from GEO data sets. Need them to be converted into fastq files for downstream analysis (fastq->SAM->BAM etc.). Can anyone suggest a tool that I can use to convert Eland files to fastq ?
I didnt try to convert eland to fastq but did you check the samtools?
http://samtools.sourceforge.net/
Some answers are there in this link
Best Luck
https://www.biostars.org/p/127495/
Use this
https://www.biostars.org/p/3121/
Hi All, thanks a lot for the leads.
I have tried many of them out. But they do not support the Eland the format. they do support the Eland Export format though...
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