Can anyone please explain how functional genes are identified using pyrosequencing reads?

Balamurugan Sadaiappan @Balamurugan_Sadaiappan

02 February 2013 1 2K Report

I am doing a microbial community analysis. I need to assess functional genes in the microbial community.

Another resource is CAMERA: http://camera.calit2.net/

Ref: Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource (2011) Shulei Sun; Jing Chen; Weizhong Li; Ilkay Altinatas; Abel Lin; Steve Peltier; Karen Stocks; Eric E. Allen; Mark Ellisman; Jeffrey Grethe; John Wooley Nucleic Acids Research 2010; doi: 10.1093/nar/gkq1102

Camera is a web-based platform that can annotate your sequence data using KEGG and or COGs.

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