Can any one suggest pipeline for 16-S based taxonomic binning from metagenomic data ?

18 April 2019 1 6K Report

We are trying to find out the condition specific microbiome from metagenomic data, for that can any one suggest pipeline for 16-S based taxonomic binning from metagenomic data ?

Jagdish Parihar

Hello,

I am using SILVA database and I think it works fine. Only thing is that it can sort out your query upto genus level.

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