Any small RNA-Seq data for bacteria and yeast?

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Zaida Ojeda

Hi Amadís. I want to help you, but I do not understand your question. You can be more explicit.

Amadís Pagès

Thanks Zaida!

Sure, I'll try to be more explicit. Small RNA-Seq is a NGS technique used to study the small non-coding RNA population of a sample. Roughly, at the time of library preparation, only RNA molecules of a certain length (e.g. 18 to 30 nt) are kept, and later sequenced. Reads resulting from the sequencing are generally stored in public repositories (such as GEO) in FASTQ or SRA format.

I'm basically looking for a high quality dataset of this type where the sample/s is/are from bacteria or yeast.

Thanks again.

Thanks a lot Phani, I'll take a look at those datasets.

I searched at NCBI, but it is always good to have a personal opinion on the quality of those datasets :)