Any recommendations for highly viscous solvent but should be non-polar and aprotic one?

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Where I can find tutorials for using AMBER molecular dynamics software on supercomputer?

Hi, I am wondering what are the files that should be prepared? how? commands? that enables me to perform MD simulations using AMBER on Supercomputer.

11 December 2019 6,157 5 View

What database or anything else enable me to find the pharmacological actions of certain pharmacophore?

I want to find a database in which i can draw the chemical structure of the core ring and it will give me all the published structures with their biological activity. For example, the...

05 June 2018 1,361 11 View

How can I get a list of FDA-approved drugs of certain category?

I'm wondering how i can find an updated list of FDA-approved drugs for example, proton pump inhibitors, Topoisomerase inhibitors or whatever category.

04 May 2018 5,097 5 View

Where I can find a downloadable list for Quartile (quantile) journals ranking?

I'm also wondering is this ranking standard or it differs from website to another.

02 March 2018 6,987 7 View

Some questions regarding proteins sequence and structural comparison?

I hope you can help in these matters. 1) What is the difference between sequence and structural comparison between proteins? 2) Which website or software is good to use to perform this task? 3)...

10 November 2017 9,829 5 View

What are files required to submit GROMACS job on supercomputer?

I don't know how to prepare input and script files for GROMACS. I appreciate if you could share example for a small job. I learnt that i have to convert .pdb file to .gro but I don't know how.

08 September 2017 2,748 13 View

Intermolecular H-bond bond can be converted into a covalent bond ?

From scientific point of view, if a h-bond is formed as in RN-H.....NAr The covalently bound proton can transfer to other side forming RN.....HN+Ar if it can take place, is there a reference for...

07 August 2017 10,152 6 View

How to purify BSA (Bovine Serum Albumin) for Absorption/Fluorescence spectroscopy use?

As you know, BSA is commercially available as 96% and 98% pure. It contains also fatty acids. Therefore, i'm wondering how to get BSA purified.

07 August 2017 5,133 3 View

Understanding synchronous fluorescence spectrum?

In Synchronous spectrum, both Exc and Fl monochromators are scanned simultaneously. MY questions are; 1) How to determine delta wavelength 2) if delta wavelength is 20nm, does it mean the data...

06 July 2017 4,191 4 View

What buffer concentration should be relative to solute concentration? Factor of 10 or 100 or 1000 of solute concentration?

For example, if I am using 1-10 uM of solute so that buffer solution should be 1mM, 100 mM or 1M (or it doesn’t matter). it seems that solutes salting out at higher buffer concentration.

06 July 2017 6,134 4 View

Ethylene glycol is newtonian or non newtonian fluid?

Some sources say it is treated as Newtonian as ethylene glycol has a higher viscosity than water, which affects the flow characteristics in simulations. But some also say it is non-Newtonian.

09 August 2024 2,111 2 View

How to calculate CCS for Sodiated adduct ions and Multiply Charged Ions?

I'm currently working on calculating the collision cross section (CCS) for various ions, and I'm facing challenges when dealing with sodiated and multiply charged ions. Most of the resources I’ve...

08 August 2024 8,329 0 View

1. If I can quantize the atom using this hyperbolic spiral and classical physics, could nature do the same?

If we map as a continuous motion an ionising electron (beginning its journey at n=1) in an H atom, a specific hyperbolic spiral appears (see animation). When we solve this spiral formula, we find...

07 August 2024 5,343 2 View

How are iso-frequency contours plotted?

Let's say we have a standard, regular hexagonal honeycomb with a 3-arm primitive unit cell (something like the figure attached; the figure is only representative and not drawn to scale). The...

07 August 2024 1,937 1 View

What is the solvent for 8YSZ nano material?

I need to do some experiment with it in liquid form.

07 August 2024 613 3 View

Which solvent is better to dissolve with secondary metabolites extracted from fungi?

I work on MCF7 cell cell for anticaner purpose and I wa to do drug preperation the drug ( secondary metabolites extracted from Aspergillus) My question which solvent is better with these secodary...

03 August 2024 4,725 2 View

Why do paired electrons atoms produce no magnetic field lines?

If you think of electrons with spin as bar magnets, you know bar magnets of opposite polarity as long as they're not occupying the same spatial location don't cancel out each other's magnetic...

03 August 2024 3,927 2 View

I need to dissolve stigmasterol for an animal experiment, it hasn't dissolved in either DMSO or vegetable oil. Can anyone recommend the best solvent?

Hello everyone, I need to dissolve stigmasterol for an animal experiment, but it hasn't dissolved in either DMSO or vegetable oil. Can anyone recommend the best solvent for stigmasterol?

01 August 2024 7,504 2 View

Best mask design for metal deposition aiming build a Perovskite solar cell device?

What types of mask designs for metal deposition, to be used in a PVD system, are best suited for perovskite-based solar cells?

31 July 2024 4,835 3 View

Inquiry on Maximum Nucleic Acid Volume for 2.5 mL Liposome Solution?

I am currently working on a project involving liposomes and need to determine the maximum volume of siRNA that can be added to a 2.5 mL liposome solution with a total lipid concentration of 10...

30 July 2024 6,420 1 View