I worked on antibiofilm activity of some enzymes by crystal violet assay on 96- wells , but what's the best way to destaining CV 95% ethanol or 33% glacial acetic acid and why ?
95% ethanol is much better than GAA. Gram positive cell wall has a stronger attraction for crystal violet when Gram's iodine is applied than does the Gram negative cell wall. It is able to form a complex with the crystal violet that is attached more tightly to the Gram-positive cell wall than to the Gram-negative cell wall. This complex can easily be washed away from the Gram-negative cell wall with ethanol. In the case of GAA, over-destaining has been observed. That's why ethanol is more preferred.
Hi all , i worked with klebsiella biofilm (gram negative ),but according to your experiments , ethanol 95% is better than GAA?? but if we compain them (ethanol and GAA ) can we have a better results ?
Are you trying to measure biofilm mass (or cell mass in biofilm) by using crystal violet staining? I'm not fond of that method for several reasons. I've used a fluorescence-based substrate and published on it, and easy to use if you have a microplate reader and microplate washer.
Again, need to identify if you are looking for a measure of residual bacteria from a biofilm or a measure of the organic matrix that comprises a biofilm? Which is it?