Yogesh Kumar

8 Questions 10 Answers 0 Followers

Questions related from Yogesh Kumar

Can anyone share a best tutorial for scRNA data handling from starting to end using R tutorial?

Hi all, I have scRNA data generated from Rapsody platform and analysed in seven bridges platform. Now could you please give me an idea how to deal with seven bridges platform output files for...

26 May 2020 9,816 1 View

Is there any available Protein-Protein Docking MD simulation protocol by Gromacs software ?

I have protein protein docking complexes of some vaccine, i would like to perform MD simulation Studies of complexes using Gromacs software, Please help if anyone have standard protocol or...

02 July 2019 4,689 2 View

How to implement chemical structure similarity search tool in local website?

Hello all, I want to embedded a chemical structure similarity search tool in my website (Database), but i was unable to do so, I know that Marvin do provide such facilities but I want some...

20 April 2018 2,166 4 View

Is there any method to retrieve the full length protein sequence from denovo sequenced draft genome data?

By using Augustus gene predictor i have predicted the genes from draft genome but, how should i confirm that these proteins were full length or incomplete? is there any bioinformatics approach to...

31 May 2016 5,052 2 View

Is anyone familiar with running PoSSuMSearch linux command line software?

PoSSuMSearch-1_3 is a command line software. I am trying to run this software on Fedora20 version, but unable to perform the task. It is showing error permission denied when running this...

18 October 2014 2,229 3 View

Can anyone tell me how to convert Fasta format (.fasta) multiple sequences into (.nhx OR nh) format for phylogenetic predictions?

I want to generate phylogenetic tree of my protein sequences by TreeBest software for that I want my sequences in these format (.nhx , .nh or .mfa ) for further analysis right now they are in...

07 January 2014 3,093 6 View

Can anyone suggest any tools or software for protein-protein interactions?

specially for host-pathogen PPIs.

17 October 2013 2,864 4 View

Special Issue "Exploring the Cutting Edge of Pharmacokinetics: Current Trends and Future Directions in Drug Behaviour and Therapy"

Another special issue here. I am delighted to update you that I am editing (Guest Editor) another particular issue in MDPI (Biomedicines) journal IF (4.757). The theme is as below. You all are...

01 January 1970 4,384 0 View