Raymond Kiu

5 Questions 9 Answers 0 Followers

Questions related from Raymond Kiu

Are there any software packages to infer phylogenetic relationship in a network visualisation?

Preferably software to generate network relationship with gene-absence-presence data (binary) will be convenient.

05 May 2017 9,498 1 View

How to calculate and compare growth rates of different bacterial strains using CFU/ml?

Is there any software to fit the CFU growth curves and estimate the growth rates? What is the simplest way to do this?

24 October 2016 9,791 2 View

Any software that could detect recombination in bacterial whole genome data? How far could we interpret this data?

When do we normally look at recombination in a large dataset of bacterial genomes- is this particularly important for medical pathogen? How do we normally interpret this?

22 September 2016 7,064 3 View

Does anyone know how to identify antimicrobial peptides secreted by bacteria?

I have aliquoted soluble media of bacteria. Just want to know what is the best method to analyse the sample - might contain small/large antimicrobial peptides?

09 December 2015 4,058 6 View

How can I assay toxins from C. perfringens?

Does anyone know how do people normally assay toxins from C. perfringens? Any recommended methods and protocols?

16 October 2015 357 4 View