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Questions related from Pandit Ramesh
We have sequenced whole genome of fungi using 3K (250bp), 8K (250bp) and shotgun (450bp) library. How can we assemble these data up to scaffold level using SOAPdenovo2? Is there any good assembler?
09 September 2014 2,885 3 View
I am working on Transcriptome sequencing of fungi. I would like to find pathogenecity related genes from fungi. HPI database provides this information, but I do not know how to make a blast or...
08 August 2013 1,789 5 View
I have to perform an induction experiment. If i preserve my induced fungal culture at -20C then could it affect the level of expressed genes? For how much time I can preserve it? Or do I have to...
02 February 2013 5,276 3 View
I have sequenced about a 700 bp gene fragment of protease from genomic DNA. Now I would like to know the coding regions and whether it has any introns? Which software should I use?
02 February 2013 4,880 5 View
Generally it classification is based on morphlogy of fungi especially its traping structure and size and shape of spores.
12 December 2011 7,957 0 View
I would like to study expressed genes diring fungi infection.
12 December 2011 7,072 0 View