Calvin Cornell

5 Questions 2 Answers 0 Followers

Questions related from Calvin Cornell

How does RASTtk decide/choice ORF based on potential disagreements between Glimmer3 and Prodigal?

Hello everyone, As my title mentions when RASTtk is detecting Open Reading Frames in a genomes it uses a combination of both Glimmer3 and Prodigal, however I am a little confused in how the...

30 July 2024 5,527 0 View

Convert discrete variables into phylogenetic independent contrasts then sufficient to run ANOVA and Kruskal-Wallis?

Hello everyone, quick question once I convert my data/traits to phylogenetic independent contrasts (PIC) can I use the resulting values of PIC for standard statical analysis such as ANOVA and...

02 November 2023 9,103 0 View

Finding and doing phylogenetic statistics on discrete variables?

Hello everyone, I hope everyone is doing well and is keeping safe. I was wondering if someone could please help me in that I want to use statistical analysis to measure whether different genera...

31 October 2023 7,072 0 View

Finding Lineage-Specific Proteins Using Orthofinder?

I hope everyone is doing well! I was wondering if someone could please help me in that I want to discover Lineage-Specific proteins in a genus of archaea using Orthofinder. Therefore, could...

06 October 2023 5,535 1 View

Is gas chromatography/isotope ratio mass spectrometry (GC-c-IRMS) a suitable method for detecting isotope uptake in phospholipids (i.e PLFA-SIP)?

Hello everyone, My lab plans to use Phospholipid Fatty Acid Stable Isotope Probing (PLFA-SIP) to see if a specific microbe utilises a certain substrate as a carbon source. Luckily our microbe has...

07 July 2022 5,738 1 View