17 Questions 32 Answers 0 Followers
Questions related from Asif Laldin
As some of the samples are incredibly diverse they do not allow for a clear, concise and legible haplotype network. Would it be appropriate to create a histogram of haplotype frequency. While...
31 July 2018 8,278 5 View
I have previously used DnaSP -> NEXUS file -> PopART which produced high quality outputs and the ability to move the network and placed in a way you so desire. However, creating nexus files...
30 June 2018 1,591 2 View
Is there a way to automate such a process whilst having all the additional data of the sequence stored in a nice legible manner?
13 June 2018 1,469 3 View
This was sparked by a quote I read ' The way that scientific publishing fetishizes novelty is gross. That's the business model of tabloids, not scientific journals. ' -Ed young
01 June 2018 516 5 View
How can I take the output grid values for my 'Population Size Change' statistics. I seem to have moved them into an excel document a few years ago but at the moment I can't seem to copy or send...
09 May 2018 4,338 2 View
What are some good introductory courses available online. Paid is fine as it would be good to have a certificate issued at the end of it.
10 April 2018 527 12 View
A phylogeny is only as good as the alignment it is built on. When comparing generated sequence data with publicly available data (ie NCBI) there seems to be a variety of problems that can arise....
28 October 2017 9,640 3 View
Few packages have the customization options built in for appropriately annotating phylogenetic trees. I was wondering if anybody has taken a tree from MEGA and put into R and been able to...
08 August 2017 5,150 1 View
I'm looking at taking the subject test for Biology and BioChem. Could any of you with experience or 'know-how' provide some advice and best avenue to approach this from. Cheers,
20 June 2017 9,908 2 View
I have a rather large number of Sanger Sequencing reads. Is there a automated method in either Ugene or a similiar freeware that allows you to quickly assemble forward and reverse reads. Ideally...
31 March 2017 707 3 View
Looking for clear explnations and interpretations as Fu's F, Tajima's D, R2, Unimodality significance etc? FST and Phist too. Cheers
02 January 2016 6,578 2 View
A free and quick method?
19 December 2015 1,210 4 View
Allozymes were commonly used up to the late 1990s. Aside from being a cheap and easy method to apply what are the other real benefits of using this method for population genetic studies. What...
26 November 2015 483 6 View
Something that is free (Seqman is costing upwards of 2000 GBP). Something that will accurately detect base pair calls among potentially conflicting data from forward and reverse reads. I have a...
07 October 2015 8,825 3 View
Looking to make Haplotype networks in the above mentioned software or any other such freeware.
06 September 2015 8,394 7 View
I am conducting a molecular phylogenetic analysis on closely related Bivalve species using COI, Cytb, 16s, 18s & 28s. Are there known to be similarities or what could be described as...
29 December 2014 6,535 2 View
Currently various authors/submitters use a variation of terms and methods for uploading sequences. Though we may not be able to change the previously submitted data it would be wise to move...
10 December 2014 8,474 3 View
