With regards to Gromacs Radius of gyration, how do I analyse the data?

Urszula Sylwia Uciechowska-Kaczmarzyk @Urszula-Uciechowska-Kaczmarzyk

22 October 2014 1 9K Report

Does anyone know how to analyse the plot obtained from gyration? I know what it means but I'm not sure how to use this measure or interpret data? I run MD for a protein in complex with DNA.

Justin Lemkul

The better question is - why did you run the analysis? What did you hope that it would tell you? Can some functional or dynamical relationship be obtained from the output?

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