I am looking for a freeware program for Windows which can take simple input file formats like SMILES, PDB, MOL etc. to give a 2D chemical structure, instead of manually drawing the whole structure.
try this one
http://www.chemaxon.com/jchem4excel/userguide/convert_to_structure_from_smil.html
Exactly what I'm looking for..thanks.
Chemaxon has some great software, software is not freeware for everyone....
Knime is. it has extensions (RDKit, CDK) that will generate 2D or 3D depctions / coordinates. of molecules. It can do much more.
www.knime.org
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