Fatal error when using pdbgmx to run NRAS bound with GTP using GROMACS 4.6.7?

I have tried to run simulation for protein complex of NRAS(5UHV) bound with Mg and GTP. However I have encountered the following error while using pdb2gmx: Program pdb2gmx, VERSION...

18 December 2019 2,246 3 View

How to get vehicle count and dataset from any one Toll plaza in India, or my research?

I wish to collect real time traffic in India. Is it feasible to get such data through any toll gate ?

04 May 2019 8,521 3 View

What is the best method to mass rear rice yellow stem borer?

Dear delegates I wish to get some information on rearing techniques of rice yellow stem borer. I started doing the same on natural host. But i face difficult and also feel cumbersome in doing mass...

02 July 2017 9,959 25 View

How to solve mixed level design in Minitab 17?

To Solve mixed level design with 3 factors and factor 1(6 level), factor 2(5level), factor3(4-level), I have used Minitab general design Full factorial -with 2 replications, totally 240...

01 February 2017 9,282 9 View

What is the standard method to perform insilico mutagenesis?

28 July 2015 9,677 4 View

What is the importance of the shape and size of the simulation box in a molecular dynamic simulation?

13 May 2015 2,676 4 View

How to extract DNA from Aspergillus spp. grown on solid medium?

Protocol for DNA extraction

11 July 2013 478 6 View

Can we classify HV and LV lines based on line length?

I have dataset which shows the length of power lines. I need to classify the lines based on the line length. Is there a rule to classify the High voltage (HV) and low voltage (LV) lines based on...

03 March 2021 4,116 4 View

Irradiation data for JAPAN?

Hi, Could you help me to get the latest (2019, 2020) solar resource data for a particular site in JAPAN? PV GIS and NSRDB data are not in reach to JAPAN, I'm looking for some other database for...

03 March 2021 961 3 View

How can the modification of garden soil cause global warming?

Hello, I am working on a soil project and I found a primary research article that tests how the modification of agricultural soil can cause global warming, using a thermal collector, however I...

02 March 2021 7,161 3 View

Can you share me how teacher education is managed in your respective national educational system?

I feel that the practice in teacher education in my country is below the expected performance level due to very poor management system. Hope I will learn something from your experiences.

02 March 2021 1,516 4 View

Are we using now IT technology effectively?

I discover now two my papers, which are more then 30 years old and which are describing something, what was done in years 1985 -...

21 February 2021 5,008 3 View

How to use Remote sensing and GIS applications for mapping the available medicinal plants within the locality/municipality?

Hello, I'm very interested in mapping and managing the conservation of the Philippine traditional medicinal plants, in which I think is very helpful in the field of medicine for further analysis...

21 February 2021 374 5 View

Is the box plot of climatic indices better illustrate from daily data or annual data?

Hello, I hope you have a good time. I work on a research project about temperature indices. Due to the high number of indices, I only work on tables and maps on an annual time scale. In other...

19 February 2021 9,742 2 View

How to consider effects of rapid warm adaptation in modeling of ecological impacts of warming?

I would highly appreciate it if my fellow ecologists (biologists) provide their opinion on the thoughts below [esp., shortly tell us which path may be more effective, if they know another way, if...

15 February 2021 3,642 6 View

Can I use the CHARMM GUI input files for Gromacs in HPC?

Good day everyone! I am a Biochemistry undergraduate in the Philippines and to be very honest, we have no background in bioinformatics since we really focused on wet lab techniques + theory. Due...

15 February 2021 3,422 4 View

What are the popular techniques for pre-processing measurement data in Smart Grid/Power System?

The data collected from various measurement devices often contains erroneous values - such as noise, missing values, etc. What are the popular techniques for pre-processing measurement data in...

14 February 2021 4,642 2 View