Hello,
Can anybody explain me the difference between SYBR Green I, SYBR Green II and SYBR Gold Dyes? When Should each of Dye be used (in context with QPCR and RNA Staining)?
Hello Dear,
ethidium bromide - traditional DNA stain, quantum yield 0.2
SYBR Gold - DNA & RNA, 10x more sensitive than EtBr, quantum yield 0.6
SYBR Green I - better for DNA, 20x more sensitive than EtBr (60 pg per band with 300 nm transillumination), quantum yield 0.8
SYBR Green II - better for RNA, detection limit is 500 pg of RNA per band in non-denaturing gels with 300 nm transillumination, quantum yield 0.5
SYBR Safe - sensitivity similar to EtBr
And for qPCR, Master mix containing SYBR Green I is recommended e.g., SYBR® Premix Ex Taq ™ II (Tli RNaseH Plus) with Cat. # RR820Q
Regards
Sheikh Gulfam
http://www.openwetware.org/wiki/DNA_dyes
http://www.mobitec.de/probes/docs/sections/0804.pdf
https://www.thermofisher.com/order/catalog/product/S11494
http://www.innovateus.net/innopedia/what-does-sybr-green-mean
Hello, Can anybody suggest me the best way to dispose Ethidium Bromide stained agarose gel. I've read few papers on the topic. Most of the paper recommended the treatment of the gel with...
09 October 2010 4,173 2 View
Hello Could any one please provide me the full text article of the following papers. Amplification of the Zfy and Zfx Genes for Sex Identification in Humans, Cattle, Sheep and Goats Eric...
07 August 2010 7,968 0 View
Hello, Can anyone please send a full-text article of the following: A molecular perspective on mammalian evolution from the gene encoding interphotoreceptor retinoid binding protein, with...
06 July 2010 3,747 1 View
06 July 2010 8,185 1 View
Hello, I want to find a consensus region within some nucleotides sequences so that I could design a primer set for Multiplex PCR. I've tried the Multiple Sequence Alignment (MSA) with...
03 April 2010 1,421 4 View
03 April 2010 6,728 0 View
If I want to compare characteristics of 2 groups of patients, one group is recruited from a random sample of the general public while another group is from a sample with a fixed gender (male to...
26 February 2021 3,526 3 View
I am looking for a classification of the research methods included in literature review papers or Meta analysis ones .
22 February 2021 1,131 4 View
Dear distinguish professors and scholars, I have a research in measuring two kinds: think tank capacity and research impact on policy. Can I do two kinds of mixed methods in order to find, "Is...
20 February 2021 6,897 1 View
I plan on running an online perceptual experiment that has, let's say, 100 unique video stimuli altogether. Since these are too many to be rated by every participants, I would like to present the...
15 February 2021 7,444 2 View
I have run an split-plot design experiment evaluating the efficacy of a treatment (with 3 whole plots and 4 sub-plots), and I am planning to analyse the collected data in Stata. However, I do...
14 February 2021 7,800 7 View
I am doing a phenomenographic study on the reading experiences of avid v. Neutral v. Non-Readers. If I use a likert survey to criterion sample for participants, does that make it a mixed method...
09 February 2021 8,594 3 View
In the realist methodology (especially by Raymond Pawson et al), the CMOc is a common structure to explain what works, for whom, in what circumstances, and why? I'm always asked about the...
08 February 2021 2,792 1 View
Hi everyone! Asking for a little help, if I may. I am working on a research project, where I aim to analyse children's drawings about Covid-19. I am fairly new to using visual data in qualitative...
07 February 2021 9,530 3 View
I am using the Harvard Trauma Questionnaire (HTQ) Trauma Events scale (original version) that has 17 items (17 different traumatic events) with 4 response options, indicating 4 levels of exposure:...
04 February 2021 1,509 3 View
Dear all, I am currently writing my master thesis where I am analysizing my data using path analysis and SEM in R (lavaan package). Now that I like to write up my results, I am struggling with...
04 February 2021 8,993 2 View