Phylogenetic analysis of fastq files from NGS (ion torrent) amplicon sequencing?

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Kaan Hürkan

hello,

You May use Lifeportal based on Galaxy Project as cloud. It is very fast and powerful. For your desktop Geneious is very Complete Solution but you need at least 8Gb of memory installed on your computer. Good luck!

Ilya Korotetskiy

Hello,

You can try Mauve software (http://darlinglab.org/mauve/mauve.html). I hope it will be useful for you

MAYTHAM ABBAS ALZUHAIRI

Dear Catarina Campos,

Try to use GALAXY (https://usegalaxy.org/), I hope it helpful.

Cheers

Maytham