Only ligand are visible in ligplot from the core protein ligand complex.. Not able to see any interactions in ligplot?

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Olawale Bolaji

there was probably an error in defining the protein and ligand molecules. You can try to check the structure manually on Notepad for errors

Suchi Chaturvedi

Dear Dr Bolaji

Thank you for suggestions. I will definitely try to do this

Jobin Thomas

Try to locate your ligand moleculae in notepad..... Use Discovery Studio for visualization..... Define the interactions then visualize the same.

Regards

Thank you for answer. I am completely new to this field..Can you please help me how to relocate the ligand in notepad. Do I need to individually save ligand and protein file and merge in notepad ...I am bit confused and want to see plots in ligplot