Multiple sequence alignment server implementation that would be able to handle large number of sequences (>1000 : approx. 9kb)?

06 June 2013 0 6K Report

I have some full genome viral sequence data I need to ultimately convert into amino acid sequences to be used as training dataset for a directional selection study. Firstly though, I need to align the nucleotide sequences, putting the them in the same frame, then trimming off UTR regions.

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