Is there any program for calculating a ration (tumor / entire section) ?

30 April 2021 1 2K Report

We have been orthotopic study to analyze the in vivo anti-cancer efficacy (brain, liver).

As you know, its study should do H&E staining to distinguish tumor from sectioned sample.

although we manually annotate the area and extract its intensity, I think, there seems like a automatic program to calculate a ratio of area (tumor / entire section).

Or Do you know some efficient and rapid way to calculate a ratio.

J. Ramirez-Franco

Hi there,

If you share an image maybe we can help. Even if there is not a specific software, this kind of calculations, I think this could be easily performed in ImageJ.

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