Is there a way to determine single nucleotide polymorphisms using any bioinformatic tool?

10 October 2014 1 9K Report

I am looking to identify single nucleotide polymorphism nucleotide sequences to study how they have evolved/diverged from each other. Is there any bioinformatic tool to identify such changes in 2 or more sequences?

Guy Bottu

There is also the old Staden software (http://staden.sourceforge.net/). It takes as input capillary sequencer "trace" files and a reference sequence in EMBL format. It can make the distinction between SNP's and heterozygous differences and show you an alignment of the "traces".

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