Is it possible to get odds ratio of a snp from clinvar database?

More Snijesh V.P.'s questions See All

What is the possibility of replicates being different from other replicates of same sample?

I have analyzed the dataset of GSE38132 from gene expression omnibus. The data is from cell line breast cancer ZR-75-1 which comprises of 9 conditions with 4 replicates for each condition making...

01 February 2020 8,693 4 View

How to perform normalization and calculate when there are multiple groups ?

I have 4 sample [control, pre-treatment, post-treatment, metastais] with 4 replicates which make total 4x4 = 16 samples I want to perform comparison of control with all other groups. For the said...

01 February 2020 5,334 2 View

How does batch correction of gene expression data affect accuracy?

I have two batches of samples which were collected during two time period. If I perform batch correction to remove batch effect will it affect the downstream analysis of gene expression studies?

11 December 2019 1,463 3 View

Does latest version of dbSNP build 151 have all 'rsids' (SNP ids)?

dbSNP has got different build (140 to 151). Does the latest version dbSNP build 151 have all snp ids (rsids) that are present in previous build

06 July 2018 4,809 0 View

Is combined approach from different research paper a novel methodology?

Consider, 4 research paper with different methodologies to prioritize genes. Combining these methods to single pipeline, can we call it as a "novel method" as together they can not be found in any...

01 February 2018 10,168 2 View

What are the best tools for Data Mining Techniques for Harvesting Data from the Internet?

I want to extract the data from the internet with specific medical terms. Which are the available tools with best accuracy or output?

01 February 2018 9,939 7 View

What is the present status of Next Generation sequencing in Clinical Diagnosis?

What is the present status of Next Generation sequencing in Clinical Diagnosis?. Is it well defined to make a conclusion for diagnosis?.

10 November 2017 9,056 3 View

Organs and part of organ classification?

Hi, I think there are about 80 organs in the human body. When I searched for list of all organs different sites are showing different list. Are there any books or publication that clearly mentions...

10 November 2017 1,146 5 View

RNA-Seq analysis cummerbund package in R?

I performed RNA-Seq data analysis using protocol given in https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3334321/. When I am using cummerbund package, it shows output like this: CuffSet instance...

07 August 2017 7,291 3 View

Identifying transcript expression from Exome Sequencing?

RNA-Seq is well known for calculating transcript expression. But, researches also do variant calling on RNA-seq data. In such case all mutations can't be identified due to alternative splicing....

07 August 2017 8,288 8 View

How to convert a privately loaded document into a public document?

I attempted to make a privately uploaded text public but a window appeared that said an error occurred. There was no explanation provided as to why there was an error or what might be done to...

05 August 2024 8,025 7 View

Hi there, someone has the SeinFit software for windows because I cannot download it?

DOS version.

29 July 2024 6,064 1 View

I need a reliable source or an example supported by excel sheet to understand Fuzzy Vikor?

27 July 2024 5,916 1 View

How to do calculation of Louvain methods calculation for excel sheet and and is there any software available?

The Louvain method – named after the University of Louvain where Blondel et al. developed the algorithm – finds communities by optimizing modularity locally for every node’s neighborhood, then...

23 July 2024 6,659 0 View

On the website RevMan, can I use OR already without raw data ?

I am conducting a systematic review and have an observational study. I want to perform some meta-analyses using the already calculated odds ratios. Can I use RevMan for this purpose? If not, do...

21 July 2024 4,110 4 View

Abaqus cylinder buckling riks analysis?

hi, I am doing a risk analysis of a cylindrical fuselage with windows. I have applied contact interactions between the different parts, and I have applied a unit value load to a reference point,...

20 July 2024 647 2 View

Why SNLO program does not opens on my computer ?

I used during a long time the program SNLO (Qmix) using computers with Windows XP, 7 and 10. First time this program worked also under Windows 11. Now (probably after the last system update) Qmix...

09 July 2024 7,243 1 View

In ETH how to generate data for microcanonical average, I have plotted diagonal elements of local operator in the eigenbasis of non-integrable Hamil.?

How to choose energy window and get data for microcanonical average .

11 June 2024 5,436 2 View

The large odds ratio and the wide confidence interval, what are the potential reasons for these findings? Is this result reliable?

In my study, I found an odds ratio (OR) of 65 with a 95% confidence interval (CI) ranging from 1.2 to 195. Given the large odds ratio and the wide confidence interval, what are the potential...

07 June 2024 402 3 View

Uncertainty estimation (standard deviation) of XPS peaks in CasaXPS?

I'm looking for a way to measure the uncertainty (standard deviation) on the quantification (area) of the components of an XPS spectrum using CasaXPS. I found these options in the software, but...

04 June 2024 902 2 View