Dear all,

I was trying to see the deposited scATAC-seq data of the Nature paper: Single-cell chromatin accessibility reveals principles of regulatory variation (GSE 65360). I cannot understand the data. I thought it should be a binary matrix, but I found bed files with bp segments of 500 bp each.

Can someone please explain to me how to interpret this kind of data? And if it is for individual single cells or for an aggregate of cells?

Thank you