Can any one guide me about what are all the insilico analysis I can do with defense genes I have isolated or obtained through Transcriptome sequencing of a resistant variety of black pepper after challenge inoculation with Phytophthora capsici
I have done expression analysis of these defense genes through qPCR. There are about 40 number of defense genes or defense related genes. I have very little knowledge about insilico tools and bioinformatics techniques.Kindly help
Hello Vijesh
Many useful references on attachment
https://journal.frontiersin.org/article/10.3389/fpls.2016.00767/pdf
2
https://dl.sciencesocieties.org/publications/tpg/pdfs/7/2/plantgenome2014.03.0011
3
https://www.omicsonline.org/amplification-cloning-and-in-silico-prediction-of-full-length-elicitin-gene-from-phytophthora-capsici-the-causal-agent-of-foot-rot-disease-of-black-pepper-2157-7471.1000181.pdf
4
https://usablight.org/sites/default/files/upload/image/Programme%20and%20abstract%20(1).pdf
11
https://worldwidescience.org/topicpages/p/pathogen+phytophthora+capsici.html
13
https://elicitra.org/vars/fichiers/Bulletin%20de%20veille/11_Elicitractu_meca-def.pdf
15
https://link.springer.com/content/pdf/10.1007%2F978-1-4939-1188-2_5.pdf
17
https://biorxiv.org/content/biorxiv/early/2017/01/06/098855.full.pdf
19
https://onlinelibrary.wiley.com/doi/10.1111/j.1365-313X.2011.04828.x/full
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